ucl.physiol.neuroconstruct.cell.converters
Class MorphMLReader

java.lang.Object
  org.xml.sax.helpers.XMLFilterImpl
      ucl.physiol.neuroconstruct.cell.converters.MorphMLReader

All Implemented Interfaces:

ContentHandler, DTDHandler, EntityResolver, ErrorHandler, XMLFilter, XMLReader

public class MorphMLReader
extends XMLFilterImpl

MorphML file Reader. Importer of MorphML/NeuroML Level1/2/3 files to neuroConstruct format using SAX

Author:

Padraig Gleeson

Constructor Summary

MorphMLReader()

Method Summary

void	characters(char[] ch, int start, int length)
void	endDocument()
void	endElement(String namespaceURI, String localName, String qName)
String	getAncestorElement(int generationsBack) Taking the child parent thing to it's logical extension...
Cell	getBuiltCell()
String	getCurrentElement()
String	getParentElement()
String	getWarnings()
static void	main(String[] args)
void	setCurrentElement(String newElement)
void	startDocument()
void	startElement(String namespaceURI, String localName, String qName, Attributes attributes)
void	stepDownElement()

Methods inherited from class org.xml.sax.helpers.XMLFilterImpl

endPrefixMapping, error, fatalError, getContentHandler, getDTDHandler, getEntityResolver, getErrorHandler, getFeature, getParent, getProperty, ignorableWhitespace, notationDecl, parse, parse, processingInstruction, resolveEntity, setContentHandler, setDocumentLocator, setDTDHandler, setEntityResolver, setErrorHandler, setFeature, setParent, setProperty, skippedEntity, startPrefixMapping, unparsedEntityDecl, warning

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

MorphMLReader

public MorphMLReader()

Method Detail

characters

public void characters(char[] ch,
                       int start,
                       int length)
                throws SAXException

Specified by:

characters in interface ContentHandler

Overrides:

characters in class XMLFilterImpl

Throws:

SAXException

getBuiltCell

public Cell getBuiltCell()

getWarnings

public String getWarnings()

startDocument

public void startDocument()

Specified by:

startDocument in interface ContentHandler

Overrides:

startDocument in class XMLFilterImpl

endDocument

public void endDocument()

Specified by:

endDocument in interface ContentHandler

Overrides:

endDocument in class XMLFilterImpl

getCurrentElement

public String getCurrentElement()

getParentElement

public String getParentElement()

getAncestorElement

public String getAncestorElement(int generationsBack)

Taking the child parent thing to it's logical extension... parent element is 1 generation back, parent's parent is 2 back, etc.

setCurrentElement

public void setCurrentElement(String newElement)

stepDownElement

public void stepDownElement()

startElement

public void startElement(String namespaceURI,
                         String localName,
                         String qName,
                         Attributes attributes)
                  throws SAXException

Specified by:

startElement in interface ContentHandler

Overrides:

startElement in class XMLFilterImpl

Throws:

SAXException

endElement

public void endElement(String namespaceURI,
                       String localName,
                       String qName)

Specified by:

endElement in interface ContentHandler

Overrides:

endElement in class XMLFilterImpl

main

public static void main(String[] args)