ucl.physiol.neuroconstruct.mechanisms
Class SynapticMechanism

java.lang.Object
  extended by ucl.physiol.neuroconstruct.mechanisms.CellMechanism
      extended by ucl.physiol.neuroconstruct.mechanisms.AbstractedCellMechanism
          extended by ucl.physiol.neuroconstruct.mechanisms.SynapticMechanism
Direct Known Subclasses:
Exp2SynMechanism

Deprecated. Use ChannelML instead...

public class SynapticMechanism
extends AbstractedCellMechanism

Base class of Cell Mechanism which represent synaptic Mechanisms

Author:
Padraig Gleeson

Field Summary
 
Fields inherited from class ucl.physiol.neuroconstruct.mechanisms.CellMechanism
ABSTRACTED_CELL_MECHANISM, CHANNEL_MECHANISM, CHANNELML_BASED_CELL_MECHANISM, description, FILE_BASED_CELL_MECHANISM, GAP_JUNCTION, instanceName, ION_CONCENTRATION, mechanismModel, mechanismType, NEUROML2_ABSTRACT_CELL, NEUROML2_BASED_CELL_MECHANISM, NEUROML2_ION_CHANNEL, POINT_PROCESS, SBML_BASED_CELL_MECHANISM, SBML_MECHANISM, SYNAPTIC_MECHANISM
 
Constructor Summary
SynapticMechanism()
          Deprecated.  
 
Method Summary
 Object clone()
          Deprecated. To ensure the base classes clone the object properly
 boolean setParameter(String parameterName, float parameterValue)
          Deprecated. Sub classes should know what the parameters mean, and so this function needs should be overridden to check values
 
Methods inherited from class ucl.physiol.neuroconstruct.mechanisms.AbstractedCellMechanism
addNewParameter, createImplementationFile, getDefaultInstanceName, getMechanismImpls, getMechanismModelAndSims, getParameter, getParameterUnits, getPhysicalParameterList, getPlotInfoFile, initialise, main, parameterExists, printDetails, setDefaultInstanceName, setMechanismImpls, setParameterDefault, setPhysicalParameterList, setPlotInfoFile, specifyNewImplFile, toString
 
Methods inherited from class ucl.physiol.neuroconstruct.mechanisms.CellMechanism
getDescription, getInstanceName, getMechanismModel, getMechanismType, isChannelMechanism, isGapJunctionMechanism, isIonConcMechanism, isPointProcess, isSynapticMechanism, setDescription, setInstanceName, setMechanismModel, setMechanismType
 
Methods inherited from class java.lang.Object
equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

SynapticMechanism

public SynapticMechanism()
Deprecated. 
Method Detail

clone

public Object clone()
Deprecated. 
Description copied from class: AbstractedCellMechanism
To ensure the base classes clone the object properly

Specified by:
clone in class AbstractedCellMechanism

setParameter

public boolean setParameter(String parameterName,
                            float parameterValue)
                     throws CellMechanismException
Deprecated. 
Description copied from class: AbstractedCellMechanism
Sub classes should know what the parameters mean, and so this function needs should be overridden to check values

Overrides:
setParameter in class AbstractedCellMechanism
Throws:
CellMechanismException