ucl.physiol.neuroconstruct.mechanisms
Class SynapticMechanism

java.lang.Object
  ucl.physiol.neuroconstruct.mechanisms.CellMechanism
      ucl.physiol.neuroconstruct.mechanisms.AbstractedCellMechanism
          ucl.physiol.neuroconstruct.mechanisms.SynapticMechanism

Direct Known Subclasses:

Exp2SynMechanism

Deprecated. Use ChannelML instead...

public class SynapticMechanism
extends AbstractedCellMechanism

Base class of Cell Mechanism which represent synaptic Mechanisms

Author:

Padraig Gleeson

Field Summary

Fields inherited from class ucl.physiol.neuroconstruct.mechanisms.CellMechanism

ABSTRACTED_CELL_MECHANISM, CHANNEL_MECHANISM, CHANNELML_BASED_CELL_MECHANISM, description, FILE_BASED_CELL_MECHANISM, GAP_JUNCTION, instanceName, ION_CONCENTRATION, mechanismModel, mechanismType, NEUROML2_ABSTRACT_CELL, NEUROML2_BASED_CELL_MECHANISM, NEUROML2_ION_CHANNEL, POINT_PROCESS, SBML_BASED_CELL_MECHANISM, SBML_MECHANISM, SYNAPTIC_MECHANISM

Constructor Summary

SynapticMechanism()
Deprecated.

Method Summary

Object	clone() Deprecated. To ensure the base classes clone the object properly
boolean	setParameter(String parameterName, float parameterValue) Deprecated. Sub classes should know what the parameters mean, and so this function needs should be overridden to check values

Methods inherited from class ucl.physiol.neuroconstruct.mechanisms.AbstractedCellMechanism

addNewParameter, createImplementationFile, getDefaultInstanceName, getMechanismImpls, getMechanismModelAndSims, getParameter, getParameterUnits, getPhysicalParameterList, getPlotInfoFile, initialise, main, parameterExists, printDetails, setDefaultInstanceName, setMechanismImpls, setParameterDefault, setPhysicalParameterList, setPlotInfoFile, specifyNewImplFile, toString

Methods inherited from class ucl.physiol.neuroconstruct.mechanisms.CellMechanism

getDescription, getInstanceName, getMechanismModel, getMechanismType, isChannelMechanism, isGapJunctionMechanism, isIonConcMechanism, isPointProcess, isSynapticMechanism, setDescription, setInstanceName, setMechanismModel, setMechanismType

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

SynapticMechanism

public SynapticMechanism()

Deprecated.

Method Detail

clone

public Object clone()

Deprecated.

Description copied from class: AbstractedCellMechanism

To ensure the base classes clone the object properly

Specified by:

clone in class AbstractedCellMechanism

setParameter

public boolean setParameter(String parameterName,
                            float parameterValue)
                     throws CellMechanismException

Deprecated.

Description copied from class: AbstractedCellMechanism

Sub classes should know what the parameters mean, and so this function needs should be overridden to check values

Overrides:

setParameter in class AbstractedCellMechanism

Throws:

CellMechanismException