ucl.physiol.neuroconstruct.neuron
Class NeuronSettings

java.lang.Object
  ucl.physiol.neuroconstruct.neuron.NeuronSettings

public class NeuronSettings
extends Object

The general parameters needed for NEURON simulations

Author:

Padraig Gleeson

Nested Class Summary

static class	NeuronSettings.DataSaveFormat
static class	NeuronSettings.GraphicsMode

Constructor Summary

NeuronSettings()

Method Summary

NeuronSettings.DataSaveFormat	getDataSaveFormat()
NeuronSettings.GraphicsMode	getGraphicsMode()
String	getNativeBlock(NativeCodeLocation ncl)
Hashtable<Float,String>	getNativeBlocks() Deprecated.
float	getVarTimeAbsTolerance()
boolean	isCopySimFiles()
boolean	isForceCorrectInit()
boolean	isForceModFileRegeneration()
boolean	isGenAllModFiles()
boolean	isGenerateComments()
boolean	isModSilentMode()
boolean	isShowShapePlot()
boolean	isVarTimeStep()
void	setCopySimFiles(boolean copySimFiles)
void	setDataSaveFormat(NeuronSettings.DataSaveFormat dataSaveFormat)
void	setForceCorrectInit(boolean forceCorrectInit)
void	setForceModFileRegeneration(boolean forceModFileRegeneration)
void	setGenAllModFiles(boolean genAllModFiles)
void	setGenerateComments(boolean generateComments)
void	setGraphicsMode(boolean graphicsMode) Deprecated.
void	setGraphicsMode(NeuronSettings.GraphicsMode graphicsMode)
void	setModSilentMode(boolean modSilentMode)
void	setNativeBlock(NativeCodeLocation ncl, String text)
void	setNativeBlocks(Hashtable nb) Deprecated.
void	setNoConsole()
void	setShowShapePlot(boolean showShapePlot)
void	setTextAfterCellCreation(String textAfterCellCreation) Deprecated.
void	setTextBeforeCellCreation(String textBeforeCellCreation) Deprecated.
void	setVarTimeAbsTolerance(float varTimeAbsTolerance)
void	setVarTimeStep(boolean useVarTimeStep)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

NeuronSettings

public NeuronSettings()

Method Detail

getNativeBlocks

public Hashtable<Float,String> getNativeBlocks()

Deprecated.

Should only be used by XMLEncoder, hence use of deprecated

setNativeBlocks

public void setNativeBlocks(Hashtable nb)

Deprecated.

Should only be used by XMLEncoder, hence use of deprecated

getNativeBlock

public String getNativeBlock(NativeCodeLocation ncl)

setNativeBlock

public void setNativeBlock(NativeCodeLocation ncl,
                           String text)

getDataSaveFormat

public NeuronSettings.DataSaveFormat getDataSaveFormat()

setDataSaveFormat

public void setDataSaveFormat(NeuronSettings.DataSaveFormat dataSaveFormat)

setTextAfterCellCreation

public void setTextAfterCellCreation(String textAfterCellCreation)

Deprecated.

Used to ensure compatibility with old method of code blocks...

setTextBeforeCellCreation

public void setTextBeforeCellCreation(String textBeforeCellCreation)

Deprecated.

Used to ensure compatibility with old method of code blocks...

isShowShapePlot

public boolean isShowShapePlot()

setShowShapePlot

public void setShowShapePlot(boolean showShapePlot)

setGraphicsMode

public void setGraphicsMode(boolean graphicsMode)

Deprecated.

setGraphicsMode

public void setGraphicsMode(NeuronSettings.GraphicsMode graphicsMode)

getGraphicsMode

public NeuronSettings.GraphicsMode getGraphicsMode()

setNoConsole

public void setNoConsole()

isGenerateComments

public boolean isGenerateComments()

setGenerateComments

public void setGenerateComments(boolean generateComments)

isVarTimeStep

public boolean isVarTimeStep()

setVarTimeStep

public void setVarTimeStep(boolean useVarTimeStep)

getVarTimeAbsTolerance

public float getVarTimeAbsTolerance()

setVarTimeAbsTolerance

public void setVarTimeAbsTolerance(float varTimeAbsTolerance)

isModSilentMode

public boolean isModSilentMode()

setModSilentMode

public void setModSilentMode(boolean modSilentMode)

isGenAllModFiles

public boolean isGenAllModFiles()

setGenAllModFiles

public void setGenAllModFiles(boolean genAllModFiles)

isForceModFileRegeneration

public boolean isForceModFileRegeneration()

setForceModFileRegeneration

public void setForceModFileRegeneration(boolean forceModFileRegeneration)

isCopySimFiles

public boolean isCopySimFiles()

setCopySimFiles

public void setCopySimFiles(boolean copySimFiles)

isForceCorrectInit

public boolean isForceCorrectInit()

setForceCorrectInit

public void setForceCorrectInit(boolean forceCorrectInit)